Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PRAMEF2O60811 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF2O60811 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF2O60811 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF2O60811 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF2O60811 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PRAMEF2O60811 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF2O60811 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF2O60811 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF2O60811 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PRAMEF2O60811 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 TSSK5P-201ENST00000423978 907 ntBASIC15.01□□□□□ -0.01
PRAMEF2O60811 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 MTND6P24-201ENST00000440466 518 ntBASIC15.01□□□□□ -0.01
PRAMEF2O60811 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 AC009118.2-201ENST00000613275 655 ntBASIC15.01□□□□□ -0.01
PRAMEF2O60811 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 CETN4P-206ENST00000642099 2168 ntBASIC15.01□□□□□ -0.01
PRAMEF2O60811 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
PRAMEF2O60811 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 LINC02199-201ENST00000506655 2702 ntBASIC15.01□□□□□ -0.01
PRAMEF2O60811 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF2O60811 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
PRAMEF2O60811 TSPY26P-202ENST00000565928 3884 ntBASIC15□□□□□ -0.01
PRAMEF2O60811 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15□□□□□ -0.01
PRAMEF2O60811 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 AC022144.1-201ENST00000602255 1580 ntBASIC15□□□□□ -0.01
PRAMEF2O60811 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
PRAMEF2O60811 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15□□□□□ -0.01
PRAMEF2O60811 COPE-202ENST00000349893 948 ntTSL 2 BASIC15□□□□□ -0.01
PRAMEF2O60811 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15□□□□□ -0.01
PRAMEF2O60811 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15□□□□□ -0.01
PRAMEF2O60811 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15□□□□□ -0.01
PRAMEF2O60811 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15□□□□□ -0.01
PRAMEF2O60811 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15□□□□□ -0.01
PRAMEF2O60811 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15□□□□□ -0.01
PRAMEF2O60811 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15□□□□□ -0.01
PRAMEF2O60811 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15□□□□□ -0.01
PRAMEF2O60811 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PRAMEF2O60811 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15□□□□□ -0.01
PRAMEF2O60811 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15□□□□□ -0.01
PRAMEF2O60811 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15□□□□□ -0.01
PRAMEF2O60811 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15□□□□□ -0.01
PRAMEF2O60811 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF2O60811 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15□□□□□ -0.01
PRAMEF2O60811 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms