Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.14■□□□□ 0.17
AP3B1O00203 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.14■□□□□ 0.17
AP3B1O00203 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
AP3B1O00203 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.14■□□□□ 0.17
AP3B1O00203 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.14■□□□□ 0.17
AP3B1O00203 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.14■□□□□ 0.17
AP3B1O00203 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.14■□□□□ 0.17
AP3B1O00203 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
AP3B1O00203 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.14■□□□□ 0.17
AP3B1O00203 AL353705.2-201ENST00000428243 662 ntBASIC16.14■□□□□ 0.17
AP3B1O00203 PHKG1P2-201ENST00000457537 863 ntBASIC16.14■□□□□ 0.17
AP3B1O00203 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.14■□□□□ 0.17
AP3B1O00203 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
AP3B1O00203 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.14■□□□□ 0.17
AP3B1O00203 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.14■□□□□ 0.17
AP3B1O00203 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.14■□□□□ 0.17
AP3B1O00203 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
AP3B1O00203 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.14■□□□□ 0.17
AP3B1O00203 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.14■□□□□ 0.17
AP3B1O00203 RARRES2P9-201ENST00000565168 469 ntBASIC16.14■□□□□ 0.17
AP3B1O00203 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.14■□□□□ 0.17
AP3B1O00203 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
AP3B1O00203 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.14■□□□□ 0.17
AP3B1O00203 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
AP3B1O00203 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.14■□□□□ 0.17
AP3B1O00203 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.14■□□□□ 0.17
AP3B1O00203 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.14■□□□□ 0.17
AP3B1O00203 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
AP3B1O00203 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP3B1O00203 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
AP3B1O00203 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
AP3B1O00203 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.13■□□□□ 0.17
AP3B1O00203 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.13■□□□□ 0.17
AP3B1O00203 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.13■□□□□ 0.17
AP3B1O00203 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
AP3B1O00203 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.13■□□□□ 0.17
AP3B1O00203 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.13■□□□□ 0.17
AP3B1O00203 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.13■□□□□ 0.17
AP3B1O00203 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
AP3B1O00203 POLD2P1-201ENST00000511220 997 ntBASIC16.13■□□□□ 0.17
AP3B1O00203 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.13■□□□□ 0.17
AP3B1O00203 SLC25A39P2-201ENST00000537614 270 ntBASIC16.13■□□□□ 0.17
AP3B1O00203 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
AP3B1O00203 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.13■□□□□ 0.17
AP3B1O00203 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.13■□□□□ 0.17
AP3B1O00203 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.13■□□□□ 0.17
AP3B1O00203 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.13■□□□□ 0.17
AP3B1O00203 AC105250.1-201ENST00000509378 2057 ntBASIC16.13■□□□□ 0.17
AP3B1O00203 AL136982.4-201ENST00000437689 1740 ntBASIC16.13■□□□□ 0.17
AP3B1O00203 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
AP3B1O00203 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
AP3B1O00203 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP3B1O00203 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
AP3B1O00203 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.12■□□□□ 0.17
AP3B1O00203 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP3B1O00203 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms