Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL139011.1-202ENST00000642063 584 ntBASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 AC073347.1-201ENST00000421633 2643 ntBASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMX2-CTNND1H3BSU7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 AC007541.1-201ENST00000570282 1469 ntBASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 DFFBP1-201ENST00000433250 979 ntBASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 RN7SL618P-201ENST00000477850 296 ntBASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
TMX2-CTNND1H3BSU7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMX2-CTNND1H3BSU7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.71■□□□□ 0.1
TMX2-CTNND1H3BSU7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.71■□□□□ 0.1
TMX2-CTNND1H3BSU7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMX2-CTNND1H3BSU7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TMX2-CTNND1H3BSU7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMX2-CTNND1H3BSU7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 AC099063.4-201ENST00000641099 1602 ntBASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 AC135586.1-201ENST00000539323 574 ntBASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 AL844908.2-201ENST00000609461 460 ntBASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 AL008721.1-201ENST00000609964 604 ntBASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 MIR6752-201ENST00000618442 71 ntBASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms