Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM88BA6NKF7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 AC148477.4-201ENST00000613430 1793 ntBASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 DNM1P30-201ENST00000563586 452 ntBASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 OR10B1P-201ENST00000601666 907 ntBASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 CDK7-214ENST00000626796 358 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 PRSS30P-206ENST00000641773 873 ntBASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 AL592424.1-201ENST00000563624 1536 ntBASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 LRRC59-203ENST00000576448 1531 ntBASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88BA6NKF7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 HTR7P1-202ENST00000624664 4411 ntBASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 GGT3P-204ENST00000453783 1664 ntBASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88BA6NKF7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 AC004899.1-201ENST00000424687 1714 ntBASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms