Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
HFM1A2PYH4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
HFM1A2PYH4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC23.22■■□□□ 1.31
HFM1A2PYH4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
HFM1A2PYH4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HFM1A2PYH4 AC093525.8-201ENST00000624099 1342 ntBASIC23.22■■□□□ 1.31
HFM1A2PYH4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HFM1A2PYH4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC23.22■■□□□ 1.31
HFM1A2PYH4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC23.22■■□□□ 1.31
HFM1A2PYH4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HFM1A2PYH4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HFM1A2PYH4 CICP13-201ENST00000422015 2789 ntBASIC23.22■■□□□ 1.31
HFM1A2PYH4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
HFM1A2PYH4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HFM1A2PYH4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HFM1A2PYH4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
HFM1A2PYH4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
HFM1A2PYH4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HFM1A2PYH4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HFM1A2PYH4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
HFM1A2PYH4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HFM1A2PYH4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HFM1A2PYH4 MSTO2P-201ENST00000314835 1709 ntBASIC23.21■■□□□ 1.31
HFM1A2PYH4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HFM1A2PYH4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HFM1A2PYH4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
HFM1A2PYH4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HFM1A2PYH4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HFM1A2PYH4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
HFM1A2PYH4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HFM1A2PYH4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
HFM1A2PYH4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC23.21■■□□□ 1.31
HFM1A2PYH4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HFM1A2PYH4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC23.21■■□□□ 1.31
HFM1A2PYH4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC23.21■■□□□ 1.31
HFM1A2PYH4 ENPP7P5-201ENST00000541031 1031 ntBASIC23.21■■□□□ 1.31
HFM1A2PYH4 HILS1-202ENST00000545329 423 ntBASIC23.21■■□□□ 1.31
HFM1A2PYH4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC23.21■■□□□ 1.31
HFM1A2PYH4 AC093813.1-201ENST00000605066 256 ntBASIC23.21■■□□□ 1.31
HFM1A2PYH4 AL162274.1-201ENST00000617191 1098 ntBASIC23.21■■□□□ 1.31
HFM1A2PYH4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HFM1A2PYH4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC23.21■■□□□ 1.31
HFM1A2PYH4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HFM1A2PYH4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HFM1A2PYH4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
HFM1A2PYH4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
HFM1A2PYH4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC23.21■■□□□ 1.31
HFM1A2PYH4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.31
HFM1A2PYH4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.31
HFM1A2PYH4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.31
HFM1A2PYH4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.31
HFM1A2PYH4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
HFM1A2PYH4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
HFM1A2PYH4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HFM1A2PYH4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC23.2■■□□□ 1.3
HFM1A2PYH4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HFM1A2PYH4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC23.2■■□□□ 1.3
HFM1A2PYH4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HFM1A2PYH4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HFM1A2PYH4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC23.2■■□□□ 1.3
HFM1A2PYH4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC23.2■■□□□ 1.3
HFM1A2PYH4 ACTG1P3-201ENST00000431775 1114 ntBASIC23.2■■□□□ 1.3
HFM1A2PYH4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC23.2■■□□□ 1.3
HFM1A2PYH4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC23.2■■□□□ 1.3
HFM1A2PYH4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC23.2■■□□□ 1.3
HFM1A2PYH4 AC068587.3-201ENST00000526613 355 ntBASIC23.2■■□□□ 1.3
HFM1A2PYH4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC23.2■■□□□ 1.3
HFM1A2PYH4 GNRHR2-203ENST00000581100 1187 ntBASIC23.2■■□□□ 1.3
HFM1A2PYH4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC23.2■■□□□ 1.3
HFM1A2PYH4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC23.2■■□□□ 1.3
HFM1A2PYH4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC23.2■■□□□ 1.3
HFM1A2PYH4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC23.2■■□□□ 1.3
HFM1A2PYH4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
HFM1A2PYH4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HFM1A2PYH4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
HFM1A2PYH4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
HFM1A2PYH4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HFM1A2PYH4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HFM1A2PYH4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HFM1A2PYH4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HFM1A2PYH4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HFM1A2PYH4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
HFM1A2PYH4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HFM1A2PYH4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
HFM1A2PYH4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
HFM1A2PYH4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HFM1A2PYH4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
HFM1A2PYH4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
HFM1A2PYH4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC23.19■■□□□ 1.3
HFM1A2PYH4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC23.19■■□□□ 1.3
HFM1A2PYH4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC23.19■■□□□ 1.3
HFM1A2PYH4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC23.19■■□□□ 1.3
HFM1A2PYH4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC23.19■■□□□ 1.3
HFM1A2PYH4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC23.19■■□□□ 1.3
HFM1A2PYH4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC23.19■■□□□ 1.3
HFM1A2PYH4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC23.19■■□□□ 1.3
HFM1A2PYH4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
HFM1A2PYH4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC23.19■■□□□ 1.3
HFM1A2PYH4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
HFM1A2PYH4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms