Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HS3ST3A1Q9Y663 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.52■□□□□ 0.08
HS3ST3A1Q9Y663 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HS3ST3A1Q9Y663 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.52■□□□□ 0.08
HS3ST3A1Q9Y663 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.52■□□□□ 0.08
HS3ST3A1Q9Y663 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.52■□□□□ 0.08
HS3ST3A1Q9Y663 AC009486.1-201ENST00000569860 813 ntBASIC15.52■□□□□ 0.08
HS3ST3A1Q9Y663 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.52■□□□□ 0.08
HS3ST3A1Q9Y663 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.52■□□□□ 0.08
HS3ST3A1Q9Y663 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.52■□□□□ 0.08
HS3ST3A1Q9Y663 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.52■□□□□ 0.08
HS3ST3A1Q9Y663 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.52■□□□□ 0.08
HS3ST3A1Q9Y663 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.52■□□□□ 0.08
HS3ST3A1Q9Y663 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HS3ST3A1Q9Y663 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
HS3ST3A1Q9Y663 AC026471.1-201ENST00000564629 3026 ntBASIC15.52■□□□□ 0.07
HS3ST3A1Q9Y663 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
HS3ST3A1Q9Y663 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HS3ST3A1Q9Y663 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HS3ST3A1Q9Y663 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HS3ST3A1Q9Y663 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HS3ST3A1Q9Y663 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
HS3ST3A1Q9Y663 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HS3ST3A1Q9Y663 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HS3ST3A1Q9Y663 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
HS3ST3A1Q9Y663 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HS3ST3A1Q9Y663 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HS3ST3A1Q9Y663 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 AC018665.1-201ENST00000622927 1362 ntBASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 MIR4313-201ENST00000580760 101 ntBASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 AC093813.1-201ENST00000605066 256 ntBASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 MIR6775-201ENST00000617557 69 ntBASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.51■□□□□ 0.07
HS3ST3A1Q9Y663 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 PCDHA14-201ENST00000506751 2298 ntBASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 AC005229.1-201ENST00000392885 409 ntBASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 AC026410.3-201ENST00000514280 936 ntBASIC15.5■□□□□ 0.07
HS3ST3A1Q9Y663 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms