Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 AC079328.2-201ENST00000561241 3354 ntBASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 AP001582.1-201ENST00000525856 295 ntBASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HCFC2Q9Y5Z7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HCFC2Q9Y5Z7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 AC006001.1-201ENST00000325130 474 ntBASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 AP001258.2-201ENST00000529891 490 ntBASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 AL022328.3-201ENST00000607943 679 ntBASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HCFC2Q9Y5Z7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms