Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 AC091046.1-201ENST00000331871 207 ntBASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 AC126915.1-201ENST00000522847 1038 ntBASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 MIR4783-201ENST00000580343 82 ntBASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 LRRC59-203ENST00000576448 1531 ntBASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 AL645939.5-201ENST00000606834 243 ntBASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 ZACNP1-201ENST00000612259 710 ntBASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 AC069224.1-201ENST00000566372 1715 ntBASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC23.52■■□□□ 1.36
CDC42BPBQ9Y5S2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
CDC42BPBQ9Y5S2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 KRTAP19-9P-201ENST00000421795 191 ntBASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 AC244452.3-201ENST00000636814 210 ntBASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC23.51■■□□□ 1.35
CDC42BPBQ9Y5S2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 CYP46A4P-201ENST00000414953 267 ntBASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 AC114812.1-204ENST00000449669 728 ntBASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 RPS2P36-201ENST00000456516 831 ntBASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 NAT9-222ENST00000583476 583 ntTSL 3 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 NAT9-224ENST00000583757 583 ntTSL 3 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 HCG18-245ENST00000602550 559 ntTSL 4 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 GHSR-202ENST00000427970 912 ntBASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms