Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGA9Q9Y5G4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.96□□□□□ -0.01
PCDHGA9Q9Y5G4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.96□□□□□ -0.01
PCDHGA9Q9Y5G4 MIR6799-201ENST00000620297 69 ntBASIC14.96□□□□□ -0.01
PCDHGA9Q9Y5G4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGA9Q9Y5G4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.96□□□□□ -0.01
PCDHGA9Q9Y5G4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGA9Q9Y5G4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGA9Q9Y5G4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGA9Q9Y5G4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
PCDHGA9Q9Y5G4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
PCDHGA9Q9Y5G4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.02
PCDHGA9Q9Y5G4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCDHGA9Q9Y5G4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
PCDHGA9Q9Y5G4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCDHGA9Q9Y5G4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PCDHGA9Q9Y5G4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCDHGA9Q9Y5G4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 MIR1909-201ENST00000411312 80 ntBASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 AL139010.1-201ENST00000454878 894 ntBASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 RRP7BP-205ENST00000566851 833 ntBASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 AC004461.2-201ENST00000629517 803 ntBASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 FER1L4-210ENST00000615531 5998 ntBASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 AC024909.3-201ENST00000611513 2257 ntBASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHGA9Q9Y5G4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 AL365203.3-201ENST00000609742 2057 ntBASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHGA9Q9Y5G4 TTTY23B-201ENST00000442790 549 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms