Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF11Q9Y3C5 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 AC011477.6-201ENST00000604980 1927 ntBASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 FAM86C2P-203ENST00000528684 1004 ntBASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 AC061975.2-201ENST00000581722 295 ntBASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF11Q9Y3C5 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 AP001282.1-201ENST00000531301 1499 ntBASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 CICP24-201ENST00000605464 2705 ntBASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 AC142381.1-201ENST00000426099 345 ntBASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 KRT8P48-201ENST00000515599 1220 ntBASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF11Q9Y3C5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms