Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
FNDC3AQ9Y2H6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FNDC3AQ9Y2H6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNDC3AQ9Y2H6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.39■□□□□ 0.21
FNDC3AQ9Y2H6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.39■□□□□ 0.21
FNDC3AQ9Y2H6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
FNDC3AQ9Y2H6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNDC3AQ9Y2H6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FNDC3AQ9Y2H6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNDC3AQ9Y2H6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNDC3AQ9Y2H6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
FNDC3AQ9Y2H6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNDC3AQ9Y2H6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
FNDC3AQ9Y2H6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 RARRES2P9-201ENST00000565168 469 ntBASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 AC003101.2-201ENST00000612557 442 ntBASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 AC022144.1-201ENST00000602255 1580 ntBASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 AC006449.6-201ENST00000612330 2296 ntBASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.38■□□□□ 0.21
FNDC3AQ9Y2H6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 OR8S1-201ENST00000310194 1080 ntBASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 NME2P1-201ENST00000426182 414 ntBASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 AC093724.1-201ENST00000448659 1027 ntBASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 POU5F1P6-201ENST00000466990 990 ntBASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 AC004233.3-201ENST00000607794 1269 ntBASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 AL138828.2-201ENST00000615812 383 ntBASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms