Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2IPQ9Y2D8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 CICP6-201ENST00000457191 2729 ntBASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 AC106886.1-201ENST00000568660 600 ntBASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 AC074044.1-201ENST00000609673 707 ntBASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 AL162274.1-201ENST00000617191 1098 ntBASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 AL109936.8-201ENST00000641772 604 ntBASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 AC060834.1-201ENST00000443027 2032 ntBASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2IPQ9Y2D8 AC005622.1-201ENST00000636801 1703 ntBASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 IGHV3-71-201ENST00000523324 359 ntBASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 AC092337.1-201ENST00000568699 1129 ntBASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2IPQ9Y2D8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms