Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 AC093724.1-201ENST00000448659 1027 ntBASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 RN7SL692P-201ENST00000464677 288 ntBASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 AC024267.1-201ENST00000582320 895 ntBASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA1Q9UND3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 AC135586.1-201ENST00000539323 574 ntBASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 AL596325.1-201ENST00000563991 1082 ntBASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms