Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.56■□□□□ 0.24
DNMT3BQ9UBC3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
DNMT3BQ9UBC3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DNMT3BQ9UBC3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
DNMT3BQ9UBC3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DNMT3BQ9UBC3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
DNMT3BQ9UBC3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 INTS4P2-202ENST00000614726 2019 ntBASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 REXO1L1P-202ENST00000608646 1974 ntBASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 HAUS4P1-201ENST00000406739 1145 ntBASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 BCRP2-202ENST00000447763 634 ntBASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 KLF2P4-201ENST00000451959 1225 ntBASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 BCRP6-201ENST00000510112 632 ntBASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 BCRP7-201ENST00000511549 544 ntBASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 SLED1-202ENST00000512051 380 ntBASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 ENPP7P5-201ENST00000541031 1031 ntBASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 AL022328.1-201ENST00000610050 478 ntBASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNMT3BQ9UBC3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 PCDHA14-201ENST00000506751 2298 ntBASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 AC136604.1-201ENST00000418535 575 ntBASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 HNRNPUP1-201ENST00000554987 333 ntBASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 AL450472.2-201ENST00000603663 1156 ntBASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNMT3BQ9UBC3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 PCDHB19P-201ENST00000570871 2371 ntBASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms