Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 AC004870.1-201ENST00000315132 882 ntBASIC15.12■□□□□ 0.01
VAPAQ9P0L0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 MRPL3P1-201ENST00000400109 1033 ntBASIC15.12■□□□□ 0.01
VAPAQ9P0L0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 KRT19P2-202ENST00000557173 1012 ntBASIC15.12■□□□□ 0.01
VAPAQ9P0L0 AC018845.2-201ENST00000568326 409 ntBASIC15.12■□□□□ 0.01
VAPAQ9P0L0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VAPAQ9P0L0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 AC079776.4-201ENST00000511039 504 ntBASIC15.11■□□□□ 0.01
VAPAQ9P0L0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 AC243562.2-201ENST00000561247 970 ntBASIC15.11■□□□□ 0.01
VAPAQ9P0L0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 AL138918.1-201ENST00000568306 659 ntBASIC15.11■□□□□ 0.01
VAPAQ9P0L0 AC061975.2-201ENST00000581722 295 ntBASIC15.11■□□□□ 0.01
VAPAQ9P0L0 Z83851.2-201ENST00000609564 659 ntBASIC15.11■□□□□ 0.01
VAPAQ9P0L0 AL161645.1-201ENST00000622716 1255 ntBASIC15.11■□□□□ 0.01
VAPAQ9P0L0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 REXO1L1P-202ENST00000608646 1974 ntBASIC15.11■□□□□ 0.01
VAPAQ9P0L0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VAPAQ9P0L0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 AC127383.1-201ENST00000444697 1800 ntBASIC15.1■□□□□ 0.01
VAPAQ9P0L0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.1■□□□□ 0.01
VAPAQ9P0L0 FAAHP1-202ENST00000446499 1238 ntBASIC15.1■□□□□ 0.01
VAPAQ9P0L0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms