Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 AC091271.1-201ENST00000611877 1162 ntBASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 AC018892.3-201ENST00000623986 2499 ntBASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 GPAA1P2-201ENST00000417923 928 ntBASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 GOLGA2P4-201ENST00000441462 777 ntBASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 KRT18P43-201ENST00000469825 1281 ntBASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 AC026410.3-201ENST00000514280 936 ntBASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 C2orf69P2-201ENST00000562032 1123 ntBASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 AL139099.5-201ENST00000635274 300 ntBASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 AC008687.7-202ENST00000637404 953 ntBASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRMT13Q9NUP7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 C2orf27AP3-201ENST00000434123 579 ntBASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 AC022137.2-201ENST00000503482 481 ntBASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 DUX4L45-201ENST00000566406 1057 ntBASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 AL354718.3-201ENST00000616414 581 ntBASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 CR382287.1-201ENST00000623954 586 ntBASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 DRD5P1-201ENST00000456605 1438 ntBASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRMT13Q9NUP7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms