Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 TSSK5P-201ENST00000423978 907 ntBASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 AL645939.2-201ENST00000427340 991 ntBASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 AC027369.6-201ENST00000525520 931 ntBASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 AL390955.2-201ENST00000603032 514 ntBASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 MIR6069-201ENST00000620069 79 ntBASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 Z97205.2-201ENST00000564697 1639 ntBASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BLOC1S4Q9NUP1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 AC100757.3-201ENST00000622361 1406 ntBASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 MIR943-201ENST00000401286 94 ntBASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 AL590560.3-201ENST00000623350 461 ntBASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BLOC1S4Q9NUP1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms