Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TLR9Q9NR96 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TLR9Q9NR96 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 AP001063.1-201ENST00000568332 529 ntBASIC16.83■□□□□ 0.28
TLR9Q9NR96 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TLR9Q9NR96 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TLR9Q9NR96 AC046158.3-201ENST00000624947 2558 ntBASIC16.83■□□□□ 0.28
TLR9Q9NR96 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TLR9Q9NR96 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.83■□□□□ 0.28
TLR9Q9NR96 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 AC078925.2-201ENST00000624013 1973 ntBASIC16.82■□□□□ 0.28
TLR9Q9NR96 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TLR9Q9NR96 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TLR9Q9NR96 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 AC106760.1-201ENST00000508690 800 ntBASIC16.81■□□□□ 0.28
TLR9Q9NR96 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 AC106886.4-201ENST00000623557 2502 ntBASIC16.81■□□□□ 0.28
TLR9Q9NR96 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 MSTO2P-201ENST00000314835 1709 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms