Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GCM1Q9NP62 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GCM1Q9NP62 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GCM1Q9NP62 KLF2P3-201ENST00000451977 1087 ntBASIC13.7□□□□□ -0.22
GCM1Q9NP62 AC245100.5-201ENST00000452108 331 ntBASIC13.7□□□□□ -0.22
GCM1Q9NP62 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 AC125807.1-201ENST00000483097 614 ntBASIC13.7□□□□□ -0.22
GCM1Q9NP62 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 RFPL4AP1-201ENST00000530883 850 ntBASIC13.7□□□□□ -0.22
GCM1Q9NP62 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GCM1Q9NP62 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 AC106028.4-201ENST00000614509 607 ntBASIC13.7□□□□□ -0.22
GCM1Q9NP62 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
GCM1Q9NP62 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
GCM1Q9NP62 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GCM1Q9NP62 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GCM1Q9NP62 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GCM1Q9NP62 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GCM1Q9NP62 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GCM1Q9NP62 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 MTHFR-217ENST00000641820 1569 ntBASIC13.7□□□□□ -0.22
GCM1Q9NP62 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GCM1Q9NP62 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.7□□□□□ -0.22
GCM1Q9NP62 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GCM1Q9NP62 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GCM1Q9NP62 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.69□□□□□ -0.22
GCM1Q9NP62 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 AC051619.7-201ENST00000568314 623 ntBASIC13.69□□□□□ -0.22
GCM1Q9NP62 AC027796.2-201ENST00000575326 344 ntBASIC13.69□□□□□ -0.22
GCM1Q9NP62 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 OR2I1P-209ENST00000641730 5365 ntBASIC13.69□□□□□ -0.22
GCM1Q9NP62 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 AL035456.1-201ENST00000456064 1369 ntBASIC13.69□□□□□ -0.22
GCM1Q9NP62 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GCM1Q9NP62 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
GCM1Q9NP62 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GCM1Q9NP62 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.68□□□□□ -0.22
GCM1Q9NP62 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms