Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 MIR346-201ENST00000362234 95 ntBASIC16.51■□□□□ 0.23
PCDH9Q9HC56 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 AC142381.1-201ENST00000426099 345 ntBASIC16.51■□□□□ 0.23
PCDH9Q9HC56 AC005237.2-201ENST00000434368 219 ntBASIC16.51■□□□□ 0.23
PCDH9Q9HC56 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 AC004835.2-201ENST00000603762 682 ntBASIC16.51■□□□□ 0.23
PCDH9Q9HC56 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 AC023824.1-201ENST00000562945 2975 ntBASIC16.51■□□□□ 0.23
PCDH9Q9HC56 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDH9Q9HC56 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 FOXO1B-201ENST00000504678 1527 ntBASIC16.5■□□□□ 0.23
PCDH9Q9HC56 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 SNHG9-202ENST00000564014 471 ntBASIC16.5■□□□□ 0.23
PCDH9Q9HC56 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 SPTSSB-204ENST00000617024 1292 ntBASIC16.5■□□□□ 0.23
PCDH9Q9HC56 AL691403.2-201ENST00000618460 490 ntBASIC16.5■□□□□ 0.23
PCDH9Q9HC56 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 AC090616.6-203ENST00000579186 1945 ntBASIC16.5■□□□□ 0.23
PCDH9Q9HC56 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.5■□□□□ 0.23
PCDH9Q9HC56 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.5■□□□□ 0.23
PCDH9Q9HC56 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH9Q9HC56 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH9Q9HC56 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 1016.4 ms