Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.52■□□□□ 0.4
POLR3FQ9H1D9 CRB3P1-201ENST00000449338 276 ntBASIC17.52■□□□□ 0.4
POLR3FQ9H1D9 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3FQ9H1D9 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3FQ9H1D9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.52■□□□□ 0.4
POLR3FQ9H1D9 TIMM17BP1-201ENST00000545713 516 ntBASIC17.52■□□□□ 0.4
POLR3FQ9H1D9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.52■□□□□ 0.4
POLR3FQ9H1D9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.52■□□□□ 0.4
POLR3FQ9H1D9 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3FQ9H1D9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3FQ9H1D9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR3FQ9H1D9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3FQ9H1D9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.52■□□□□ 0.39
POLR3FQ9H1D9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.52■□□□□ 0.39
POLR3FQ9H1D9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3FQ9H1D9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3FQ9H1D9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
POLR3FQ9H1D9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
POLR3FQ9H1D9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3FQ9H1D9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3FQ9H1D9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
POLR3FQ9H1D9 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.52■□□□□ 0.39
POLR3FQ9H1D9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR3FQ9H1D9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.52■□□□□ 0.39
POLR3FQ9H1D9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 KRT18P64-201ENST00000434946 1219 ntBASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 TPRX2P-201ENST00000535362 881 ntBASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 AC023310.3-201ENST00000557027 670 ntBASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 AC100756.1-201ENST00000562736 682 ntBASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 AC138749.3-201ENST00000567691 622 ntBASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 AC116165.1-201ENST00000611806 668 ntBASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
POLR3FQ9H1D9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 AC093004.1-201ENST00000508850 424 ntBASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 MIR4313-201ENST00000580760 101 ntBASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 AP003680.1-201ENST00000598970 3660 ntBASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR3FQ9H1D9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms