Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHOX2BQ99453 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHOX2BQ99453 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 MIR3619-201ENST00000579667 83 ntBASIC16.17■□□□□ 0.18
PHOX2BQ99453 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHOX2BQ99453 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHOX2BQ99453 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHOX2BQ99453 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHOX2BQ99453 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHOX2BQ99453 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHOX2BQ99453 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHOX2BQ99453 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHOX2BQ99453 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.17■□□□□ 0.18
PHOX2BQ99453 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHOX2BQ99453 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHOX2BQ99453 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PHOX2BQ99453 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHOX2BQ99453 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHOX2BQ99453 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PHOX2BQ99453 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 RPL13AP19-201ENST00000434320 584 ntBASIC16.16■□□□□ 0.18
PHOX2BQ99453 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 RN7SL399P-201ENST00000471648 279 ntBASIC16.16■□□□□ 0.18
PHOX2BQ99453 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PHOX2BQ99453 TIMM17BP1-201ENST00000545713 516 ntBASIC16.16■□□□□ 0.18
PHOX2BQ99453 PTP4A1P2-201ENST00000546033 454 ntBASIC16.16■□□□□ 0.18
PHOX2BQ99453 AC079316.1-201ENST00000548397 411 ntBASIC16.16■□□□□ 0.18
PHOX2BQ99453 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 AL139327.4-201ENST00000612362 153 ntBASIC16.16■□□□□ 0.18
PHOX2BQ99453 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHOX2BQ99453 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
PHOX2BQ99453 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHOX2BQ99453 OR6D1P-203ENST00000641209 4860 ntBASIC16.16■□□□□ 0.18
PHOX2BQ99453 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHOX2BQ99453 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHOX2BQ99453 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 AC133963.1-201ENST00000504166 1679 ntBASIC16.15■□□□□ 0.18
PHOX2BQ99453 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 AC005695.3-201ENST00000614522 232 ntBASIC16.15■□□□□ 0.18
PHOX2BQ99453 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHOX2BQ99453 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.15■□□□□ 0.18
PHOX2BQ99453 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms