Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 HLA-DMA-202ENST00000395303 1007 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 HLA-DMA-203ENST00000395305 777 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 KRT18P44-201ENST00000416086 1285 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AC000078.1-201ENST00000420617 682 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 RNASEH2CP1-201ENST00000454281 502 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 BCRP4-201ENST00000506079 804 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AC008972.2-201ENST00000606587 494 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC4.7□□□□□ -1.66
HMCN1Q96RW7 AC006277.1-201ENST00000624348 1610 ntBASIC4.7□□□□□ -1.66
HMCN1Q96RW7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 MESTP4-201ENST00000412333 1204 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AL592076.1-201ENST00000424448 303 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 SAP18P2-201ENST00000434334 459 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 OR2A1-AS1-203ENST00000468575 568 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 URB1-AS1-201ENST00000534991 831 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 MIR6819-201ENST00000622122 61 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AC012317.2-201ENST00000623305 2251 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 FTX-216ENST00000638985 1367 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AC009517.1-201ENST00000454750 570 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AP000920.1-201ENST00000531824 344 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AC005324.6-201ENST00000587972 613 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 E2F3P2-201ENST00000447755 1422 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AC226150.1-201ENST00000544259 466 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 MIR4321-201ENST00000592276 80 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms