Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 AC127024.7-201ENST00000625101 200 ntBASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 AL512652.2-201ENST00000625156 1716 ntBASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 AC008132.1-202ENST00000342005 1389 ntBASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 AZGP1P1-201ENST00000411909 902 ntBASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 BAATP1-201ENST00000412284 1225 ntBASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 CEP164P1-201ENST00000455142 418 ntBASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 RN7SL8P-201ENST00000461771 266 ntBASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 COX5BP1-201ENST00000507622 393 ntBASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 NPM1P43-201ENST00000558669 786 ntBASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 AC024267.1-201ENST00000582320 895 ntBASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 PAUPAR-201ENST00000630360 2965 ntBASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 NKILA-202ENST00000614771 2598 ntBASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 AC120045.2-201ENST00000567334 178 ntBASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 AC132192.2-201ENST00000596206 1147 ntBASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 DGAT2L7P-201ENST00000602462 744 ntBASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 ECM1P1-201ENST00000604092 1279 ntBASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 AL023775.1-201ENST00000454907 1746 ntBASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.36□□□□□ -0.27
CSMD1Q96PZ7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 AC022217.1-201ENST00000521069 738 ntBASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CSMD1Q96PZ7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms