Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 AC008735.3-201ENST00000596646 500 ntBASIC15.98■□□□□ 0.15
SIPA1Q96FS4 AC010319.3-201ENST00000597028 470 ntBASIC15.98■□□□□ 0.15
SIPA1Q96FS4 AL391069.4-201ENST00000609583 481 ntBASIC15.98■□□□□ 0.15
SIPA1Q96FS4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 ME2P1-201ENST00000426028 1970 ntBASIC15.98■□□□□ 0.15
SIPA1Q96FS4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 AP001282.1-201ENST00000531301 1499 ntBASIC15.97■□□□□ 0.15
SIPA1Q96FS4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 AC092171.3-201ENST00000610122 2651 ntBASIC15.97■□□□□ 0.15
SIPA1Q96FS4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.97■□□□□ 0.15
SIPA1Q96FS4 RPS2P32-201ENST00000439199 892 ntBASIC15.97■□□□□ 0.15
SIPA1Q96FS4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 AC133539.2-201ENST00000604757 467 ntBASIC15.97■□□□□ 0.15
SIPA1Q96FS4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 AC018695.7-201ENST00000624587 2492 ntBASIC15.97■□□□□ 0.15
SIPA1Q96FS4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SIPA1Q96FS4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 HAUS4P1-201ENST00000406739 1145 ntBASIC15.96■□□□□ 0.15
SIPA1Q96FS4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 AC074338.1-201ENST00000416825 156 ntBASIC15.96■□□□□ 0.15
SIPA1Q96FS4 AL442647.2-201ENST00000429864 857 ntBASIC15.96■□□□□ 0.15
SIPA1Q96FS4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.96■□□□□ 0.15
SIPA1Q96FS4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIPA1Q96FS4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms