Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 HLA-A-202ENST00000376806 1854 ntBASIC15.47■□□□□ 0.07
RNF31Q96EP0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 SPTLC1P1-201ENST00000447199 261 ntBASIC15.47■□□□□ 0.07
RNF31Q96EP0 AC009477.1-201ENST00000452936 217 ntBASIC15.47■□□□□ 0.07
RNF31Q96EP0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.47■□□□□ 0.07
RNF31Q96EP0 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.47■□□□□ 0.07
RNF31Q96EP0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.47■□□□□ 0.07
RNF31Q96EP0 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.47■□□□□ 0.07
RNF31Q96EP0 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.47■□□□□ 0.07
RNF31Q96EP0 AC025048.6-201ENST00000634326 1161 ntBASIC15.47■□□□□ 0.07
RNF31Q96EP0 AC068587.6-202ENST00000641839 5619 ntBASIC15.47■□□□□ 0.07
RNF31Q96EP0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF31Q96EP0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF31Q96EP0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 PCGF3-213ENST00000620529 1899 ntBASIC15.46■□□□□ 0.07
RNF31Q96EP0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 AC005622.1-201ENST00000636801 1703 ntBASIC15.46■□□□□ 0.07
RNF31Q96EP0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF31Q96EP0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF31Q96EP0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF31Q96EP0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF31Q96EP0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF31Q96EP0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF31Q96EP0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF31Q96EP0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF31Q96EP0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF31Q96EP0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 WASH4P-201ENST00000564273 1246 ntBASIC15.46■□□□□ 0.07
RNF31Q96EP0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF31Q96EP0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF31Q96EP0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF31Q96EP0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF31Q96EP0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF31Q96EP0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNF31Q96EP0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNF31Q96EP0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RNF31Q96EP0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
RNF31Q96EP0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.46■□□□□ 0.06
RNF31Q96EP0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNF31Q96EP0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.46■□□□□ 0.06
RNF31Q96EP0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
RNF31Q96EP0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
RNF31Q96EP0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
RNF31Q96EP0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF31Q96EP0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF31Q96EP0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF31Q96EP0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF31Q96EP0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF31Q96EP0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF31Q96EP0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF31Q96EP0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF31Q96EP0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF31Q96EP0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF31Q96EP0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF31Q96EP0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF31Q96EP0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF31Q96EP0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF31Q96EP0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms