Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 AC093813.1-201ENST00000605066 256 ntBASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 AL354718.3-201ENST00000616414 581 ntBASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 CR382287.1-201ENST00000623954 586 ntBASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 GNRHR2-203ENST00000581100 1187 ntBASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 AC107373.2-201ENST00000607735 490 ntBASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 AC244093.1-201ENST00000610837 814 ntBASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 AC009542.2-202ENST00000619004 1067 ntBASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 AC018892.3-201ENST00000623986 2499 ntBASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RAPGEF4Q8WZA2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 DERL2-202ENST00000570848 657 ntTSL 5 BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 FLJ38576-201ENST00000623820 2459 ntBASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAPGEF4Q8WZA2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.71■□□□□ 0.91
RAPGEF4Q8WZA2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms