Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 AC025678.2-201ENST00000562061 970 ntBASIC16.26■□□□□ 0.19
PTCD2Q8WV60 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 AC061975.2-201ENST00000581722 295 ntBASIC16.26■□□□□ 0.19
PTCD2Q8WV60 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 AL390955.2-201ENST00000603032 514 ntBASIC16.26■□□□□ 0.19
PTCD2Q8WV60 AC090950.1-202ENST00000605733 644 ntBASIC16.26■□□□□ 0.19
PTCD2Q8WV60 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 AL512356.2-201ENST00000546955 174 ntBASIC16.25■□□□□ 0.19
PTCD2Q8WV60 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 AC005954.1-201ENST00000591962 337 ntTSL 3 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 AC073575.2-201ENST00000614212 627 ntBASIC16.25■□□□□ 0.19
PTCD2Q8WV60 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTCD2Q8WV60 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 FAM220BP-201ENST00000377689 816 ntBASIC16.24■□□□□ 0.19
PTCD2Q8WV60 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 AC087272.1-201ENST00000523624 533 ntBASIC16.24■□□□□ 0.19
PTCD2Q8WV60 AC069262.1-201ENST00000539058 672 ntBASIC16.24■□□□□ 0.19
PTCD2Q8WV60 AC243562.2-201ENST00000561247 970 ntBASIC16.24■□□□□ 0.19
PTCD2Q8WV60 AC005498.2-205ENST00000593218 784 ntBASIC16.24■□□□□ 0.19
PTCD2Q8WV60 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCD2Q8WV60 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms