Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 HNRNPUP1-201ENST00000554987 333 ntBASIC17.13■□□□□ 0.33
BEST2Q8NFU1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 AL132655.2-201ENST00000596276 594 ntBASIC17.13■□□□□ 0.33
BEST2Q8NFU1 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 AC025048.6-201ENST00000634326 1161 ntBASIC17.13■□□□□ 0.33
BEST2Q8NFU1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 LINC02447-202ENST00000501888 2146 ntBASIC17.12■□□□□ 0.33
BEST2Q8NFU1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 AC136604.1-201ENST00000418535 575 ntBASIC17.12■□□□□ 0.33
BEST2Q8NFU1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 GAPDHP21-201ENST00000450301 1010 ntBASIC17.12■□□□□ 0.33
BEST2Q8NFU1 AC093004.1-201ENST00000508850 424 ntBASIC17.12■□□□□ 0.33
BEST2Q8NFU1 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 TPRX2P-201ENST00000535362 881 ntBASIC17.12■□□□□ 0.33
BEST2Q8NFU1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 AL035252.4-201ENST00000624174 288 ntBASIC17.12■□□□□ 0.33
BEST2Q8NFU1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST2Q8NFU1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.11■□□□□ 0.33
BEST2Q8NFU1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 MEP1AP4-201ENST00000423244 1087 ntBASIC17.11■□□□□ 0.33
BEST2Q8NFU1 DFFBP1-201ENST00000433250 979 ntBASIC17.11■□□□□ 0.33
BEST2Q8NFU1 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 AL353779.1-201ENST00000434793 351 ntBASIC17.11■□□□□ 0.33
BEST2Q8NFU1 AL589987.1-201ENST00000453380 819 ntBASIC17.11■□□□□ 0.33
BEST2Q8NFU1 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BEST2Q8NFU1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms