Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 PTENP1-202ENST00000532280 3996 ntBASIC11.99□□□□□ -0.49
NUP35Q8NFH5 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 HOMER2P1-201ENST00000455653 964 ntBASIC11.99□□□□□ -0.49
NUP35Q8NFH5 AC087163.2-201ENST00000457299 853 ntBASIC11.99□□□□□ -0.49
NUP35Q8NFH5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.99□□□□□ -0.49
NUP35Q8NFH5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 LINC01230-201ENST00000625222 3017 ntBASIC11.99□□□□□ -0.49
NUP35Q8NFH5 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NUP35Q8NFH5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.98□□□□□ -0.49
NUP35Q8NFH5 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 AC079776.2-201ENST00000641154 1609 ntBASIC11.98□□□□□ -0.49
NUP35Q8NFH5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 AC010203.1-204ENST00000548782 407 ntBASIC11.98□□□□□ -0.49
NUP35Q8NFH5 AL160237.2-201ENST00000556165 472 ntBASIC11.98□□□□□ -0.49
NUP35Q8NFH5 DUT-205ENST00000558813 769 ntTSL 2 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.98□□□□□ -0.49
NUP35Q8NFH5 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms