Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 AL021578.1-201ENST00000613646 709 ntBASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 AC015818.8-201ENST00000587907 1519 ntBASIC17.37■□□□□ 0.37
KLHDC9Q8NEP7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 MTX1P1-201ENST00000440904 838 ntBASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 BX284668.4-201ENST00000453917 508 ntBASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 AL590640.2-201ENST00000457038 527 ntBASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 EEF1DP1-201ENST00000585891 896 ntBASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 BX539320.1-201ENST00000623759 877 ntBASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 AC138028.6-201ENST00000616106 1482 ntBASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.36■□□□□ 0.37
KLHDC9Q8NEP7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 AC091804.1-201ENST00000486888 567 ntBASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 ACTG1P17-201ENST00000558391 1119 ntBASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 AC104982.3-201ENST00000581995 514 ntBASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHDC9Q8NEP7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms