Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 CYP4F24P-201ENST00000586049 1580 ntBASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 AC010491.1-201ENST00000563101 2797 ntBASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 AC139530.3-201ENST00000620344 690 ntBASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SRFBP1Q8NEF9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 AL136982.4-201ENST00000437689 1740 ntBASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 CNN2P2-201ENST00000443536 909 ntBASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 CNN2P3-201ENST00000450201 906 ntBASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 AC004449.1-201ENST00000564240 433 ntBASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 AL136317.3-201ENST00000618497 906 ntBASIC15.27■□□□□ 0.04
SRFBP1Q8NEF9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SRFBP1Q8NEF9 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRFBP1Q8NEF9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRFBP1Q8NEF9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.27■□□□□ 0.03
SRFBP1Q8NEF9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.27■□□□□ 0.03
SRFBP1Q8NEF9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.27■□□□□ 0.03
SRFBP1Q8NEF9 BNIP3P1-202ENST00000550043 1585 ntBASIC15.27■□□□□ 0.03
SRFBP1Q8NEF9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRFBP1Q8NEF9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRFBP1Q8NEF9 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SRFBP1Q8NEF9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.27■□□□□ 0.03
SRFBP1Q8NEF9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 KRT8P37-201ENST00000451609 1420 ntBASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 AP005117.1-202ENST00000581724 1908 ntBASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms