Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT4Q8N9R6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT4Q8N9R6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT4Q8N9R6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT4Q8N9R6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT4Q8N9R6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
CDRT4Q8N9R6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDRT4Q8N9R6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.83□□□□□ -0.03
CDRT4Q8N9R6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.83□□□□□ -0.03
CDRT4Q8N9R6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.03
CDRT4Q8N9R6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.83□□□□□ -0.03
CDRT4Q8N9R6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 AC018892.3-201ENST00000623986 2499 ntBASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 SPDYE17-201ENST00000412399 783 ntBASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 MIR4453-201ENST00000584019 89 ntBASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 LINC00628-201ENST00000628516 1289 ntBASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT4Q8N9R6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 HLA-J-203ENST00000494367 1087 ntBASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 AL691403.2-201ENST00000618460 490 ntBASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.82□□□□□ -0.04
CDRT4Q8N9R6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT4Q8N9R6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT4Q8N9R6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.81□□□□□ -0.04
CDRT4Q8N9R6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT4Q8N9R6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT4Q8N9R6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.81□□□□□ -0.04
CDRT4Q8N9R6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT4Q8N9R6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT4Q8N9R6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CDRT4Q8N9R6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.81□□□□□ -0.04
CDRT4Q8N9R6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CDRT4Q8N9R6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT4Q8N9R6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT4Q8N9R6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms