Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 AC004987.2-201ENST00000395959 1148 ntBASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 RPS8P6-201ENST00000426177 609 ntBASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 AC004967.1-201ENST00000453589 447 ntBASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 AC023141.5-201ENST00000458585 616 ntBASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 SNHG9-202ENST00000564014 471 ntBASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 AC018529.1-201ENST00000613063 361 ntBASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 AC018892.3-201ENST00000623986 2499 ntBASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CCDC116Q8IYX3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC116Q8IYX3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
CCDC116Q8IYX3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC116Q8IYX3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC116Q8IYX3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.08■□□□□ 0.01
CCDC116Q8IYX3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC116Q8IYX3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.08■□□□□ 0.01
CCDC116Q8IYX3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC116Q8IYX3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 AP006288.1-201ENST00000446065 395 ntBASIC15.08■□□□□ 0
CCDC116Q8IYX3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCDC116Q8IYX3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC116Q8IYX3 AC026150.2-201ENST00000564693 1156 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms