Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 MIR574-201ENST00000385209 96 ntBASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 ADH5P3-201ENST00000433842 1137 ntBASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 TIMM8BP1-201ENST00000452384 211 ntBASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 KRT8P48-201ENST00000515599 1220 ntBASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 FAM86C2P-203ENST00000528684 1004 ntBASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 AC061975.2-201ENST00000581722 295 ntBASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 AL161772.1-201ENST00000610494 4412 ntBASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 AC136621.1-201ENST00000624017 2304 ntBASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 AC018892.3-201ENST00000623986 2499 ntBASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 AC142381.1-201ENST00000426099 345 ntBASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 SPCS2P4-201ENST00000436160 681 ntBASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 RN7SL589P-201ENST00000481268 310 ntBASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 PGAM5P1-201ENST00000518923 814 ntBASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 AC243562.1-201ENST00000560672 389 ntBASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 AC024267.1-201ENST00000582320 895 ntBASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 AC026120.1-201ENST00000611536 926 ntBASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.17□□□□□ -0.14
LINC00346Q8IVM7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00346Q8IVM7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms