Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 AC079776.1-201ENST00000401540 1152 ntBASIC17.75■□□□□ 0.43
TRIM50Q86XT4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 TTTY23B-201ENST00000442790 549 ntBASIC17.75■□□□□ 0.43
TRIM50Q86XT4 GPR53P-205ENST00000457298 1084 ntBASIC17.75■□□□□ 0.43
TRIM50Q86XT4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 AP001282.1-201ENST00000531301 1499 ntBASIC17.75■□□□□ 0.43
TRIM50Q86XT4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 HNRNPUP1-201ENST00000554987 333 ntBASIC17.74■□□□□ 0.43
TRIM50Q86XT4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM50Q86XT4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 RN7SL399P-201ENST00000471648 279 ntBASIC17.73■□□□□ 0.43
TRIM50Q86XT4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TRIM50Q86XT4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms