Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 Z97205.2-201ENST00000564697 1639 ntBASIC15.65■□□□□ 0.1
LRRTM4Q86VH4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
LRRTM4Q86VH4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 AC104794.3-201ENST00000566840 1248 ntBASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 AC004461.2-201ENST00000629517 803 ntBASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 AL603832.2-201ENST00000566195 2125 ntBASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRTM4Q86VH4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 AC024909.3-201ENST00000611513 2257 ntBASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 AC008741.2-201ENST00000612792 3115 ntBASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 HNRNPUP1-201ENST00000554987 333 ntBASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 AC004233.3-201ENST00000607794 1269 ntBASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM4Q86VH4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms