Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
UBE3BQ7Z3V4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 AL118508.1-201ENST00000613502 2345 ntBASIC19.79■□□□□ 0.76
UBE3BQ7Z3V4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 LINC02447-202ENST00000501888 2146 ntBASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 FAM86LP-201ENST00000478302 853 ntBASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
UBE3BQ7Z3V4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 OR8S1-201ENST00000310194 1080 ntBASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 TMEM14DP-201ENST00000422205 345 ntBASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 MIR4313-201ENST00000580760 101 ntBASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms