Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 SPDYE19P-201ENST00000338590 713 ntBASIC14.43□□□□□ -0.1
RTL6Q6ICC9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 AC114501.2-201ENST00000439631 535 ntBASIC14.43□□□□□ -0.1
RTL6Q6ICC9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 AL139010.1-201ENST00000454878 894 ntBASIC14.43□□□□□ -0.1
RTL6Q6ICC9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.43□□□□□ -0.1
RTL6Q6ICC9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 LINC01144-201ENST00000626198 1710 ntBASIC14.43□□□□□ -0.1
RTL6Q6ICC9 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 AC092171.3-201ENST00000610122 2651 ntBASIC14.43□□□□□ -0.1
RTL6Q6ICC9 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTL6Q6ICC9 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 AL513477.1-201ENST00000602865 2407 ntBASIC14.42□□□□□ -0.1
RTL6Q6ICC9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 DFFBP1-201ENST00000433250 979 ntBASIC14.42□□□□□ -0.1
RTL6Q6ICC9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 DOC2GP-202ENST00000514950 1163 ntBASIC14.42□□□□□ -0.1
RTL6Q6ICC9 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 AC140912.1-201ENST00000577171 1054 ntBASIC14.42□□□□□ -0.1
RTL6Q6ICC9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTL6Q6ICC9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms