Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGCS1Q01581 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGCS1Q01581 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGCS1Q01581 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGCS1Q01581 KRT8P48-201ENST00000515599 1220 ntBASIC15.42■□□□□ 0.06
HMGCS1Q01581 RNA5SP410-201ENST00000516285 106 ntBASIC15.42■□□□□ 0.06
HMGCS1Q01581 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 AC023824.1-201ENST00000562945 2975 ntBASIC15.42■□□□□ 0.06
HMGCS1Q01581 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 AC024267.1-201ENST00000582320 895 ntBASIC15.42■□□□□ 0.06
HMGCS1Q01581 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGCS1Q01581 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGCS1Q01581 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGCS1Q01581 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGCS1Q01581 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGCS1Q01581 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGCS1Q01581 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HMGCS1Q01581 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGCS1Q01581 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.41■□□□□ 0.06
HMGCS1Q01581 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
HMGCS1Q01581 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HMGCS1Q01581 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HMGCS1Q01581 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.41■□□□□ 0.06
HMGCS1Q01581 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.41■□□□□ 0.06
HMGCS1Q01581 SPCS2P4-201ENST00000436160 681 ntBASIC15.41■□□□□ 0.06
HMGCS1Q01581 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HMGCS1Q01581 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.41■□□□□ 0.06
HMGCS1Q01581 FAM86C2P-203ENST00000528684 1004 ntBASIC15.41■□□□□ 0.06
HMGCS1Q01581 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.41■□□□□ 0.06
HMGCS1Q01581 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.41■□□□□ 0.06
HMGCS1Q01581 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.41■□□□□ 0.06
HMGCS1Q01581 AC243562.2-201ENST00000561247 970 ntBASIC15.41■□□□□ 0.06
HMGCS1Q01581 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.41■□□□□ 0.06
HMGCS1Q01581 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.41■□□□□ 0.06
HMGCS1Q01581 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.41■□□□□ 0.06
HMGCS1Q01581 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.41■□□□□ 0.06
HMGCS1Q01581 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCS1Q01581 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.41■□□□□ 0.06
HMGCS1Q01581 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCS1Q01581 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HMGCS1Q01581 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCS1Q01581 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HMGCS1Q01581 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCS1Q01581 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.4■□□□□ 0.06
HMGCS1Q01581 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
HMGCS1Q01581 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGCS1Q01581 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.4■□□□□ 0.06
HMGCS1Q01581 AC087481.3-201ENST00000602886 1894 ntBASIC15.4■□□□□ 0.06
HMGCS1Q01581 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCS1Q01581 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCS1Q01581 AC063926.3-201ENST00000624734 5658 ntBASIC15.4■□□□□ 0.06
HMGCS1Q01581 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCS1Q01581 AC009090.5-201ENST00000624886 2285 ntBASIC15.4■□□□□ 0.06
HMGCS1Q01581 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCS1Q01581 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCS1Q01581 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HMGCS1Q01581 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HMGCS1Q01581 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCS1Q01581 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGCS1Q01581 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCS1Q01581 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCS1Q01581 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCS1Q01581 YBX2P1-201ENST00000394192 760 ntBASIC15.4■□□□□ 0.06
HMGCS1Q01581 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCS1Q01581 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCS1Q01581 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.4■□□□□ 0.06
HMGCS1Q01581 SPDYE11-202ENST00000450699 704 ntBASIC15.4■□□□□ 0.06
HMGCS1Q01581 RN7SL589P-201ENST00000481268 310 ntBASIC15.4■□□□□ 0.06
HMGCS1Q01581 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.4■□□□□ 0.06
HMGCS1Q01581 AC079140.1-201ENST00000508039 487 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms