Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASIC1P78348 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASIC1P78348 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
ASIC1P78348 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASIC1P78348 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ASIC1P78348 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ASIC1P78348 REXO1L1P-202ENST00000608646 1974 ntBASIC17.84■□□□□ 0.45
ASIC1P78348 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.84■□□□□ 0.45
ASIC1P78348 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.84■□□□□ 0.45
ASIC1P78348 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.84■□□□□ 0.45
ASIC1P78348 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ASIC1P78348 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASIC1P78348 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASIC1P78348 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.84■□□□□ 0.45
ASIC1P78348 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ASIC1P78348 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASIC1P78348 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.84■□□□□ 0.45
ASIC1P78348 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASIC1P78348 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASIC1P78348 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASIC1P78348 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ASIC1P78348 RBPMS2P1-201ENST00000437762 623 ntBASIC17.84■□□□□ 0.45
ASIC1P78348 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ASIC1P78348 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.84■□□□□ 0.45
ASIC1P78348 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.84■□□□□ 0.45
ASIC1P78348 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.84■□□□□ 0.45
ASIC1P78348 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ASIC1P78348 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.84■□□□□ 0.45
ASIC1P78348 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ASIC1P78348 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ASIC1P78348 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ASIC1P78348 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ASIC1P78348 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.84■□□□□ 0.45
ASIC1P78348 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ASIC1P78348 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASIC1P78348 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ASIC1P78348 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ASIC1P78348 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
ASIC1P78348 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.84■□□□□ 0.45
ASIC1P78348 AC063926.3-201ENST00000624734 5658 ntBASIC17.83■□□□□ 0.45
ASIC1P78348 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.83■□□□□ 0.45
ASIC1P78348 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ASIC1P78348 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
ASIC1P78348 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ASIC1P78348 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ASIC1P78348 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.83■□□□□ 0.44
ASIC1P78348 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ASIC1P78348 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.83■□□□□ 0.44
ASIC1P78348 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.83■□□□□ 0.44
ASIC1P78348 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.83■□□□□ 0.44
ASIC1P78348 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
ASIC1P78348 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.83■□□□□ 0.44
ASIC1P78348 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ASIC1P78348 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ASIC1P78348 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
ASIC1P78348 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ASIC1P78348 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ASIC1P78348 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ASIC1P78348 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ASIC1P78348 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.82■□□□□ 0.44
ASIC1P78348 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.82■□□□□ 0.44
ASIC1P78348 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
ASIC1P78348 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ASIC1P78348 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
ASIC1P78348 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.82■□□□□ 0.44
ASIC1P78348 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 AL353705.2-201ENST00000428243 662 ntBASIC17.82■□□□□ 0.44
ASIC1P78348 GPS2P2-201ENST00000430745 888 ntBASIC17.82■□□□□ 0.44
ASIC1P78348 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.82■□□□□ 0.44
ASIC1P78348 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.82■□□□□ 0.44
ASIC1P78348 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.82■□□□□ 0.44
ASIC1P78348 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.82■□□□□ 0.44
ASIC1P78348 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.82■□□□□ 0.44
ASIC1P78348 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.82■□□□□ 0.44
ASIC1P78348 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
ASIC1P78348 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.82■□□□□ 0.44
ASIC1P78348 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ASIC1P78348 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ASIC1P78348 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.82■□□□□ 0.44
ASIC1P78348 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ASIC1P78348 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ASIC1P78348 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms