Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.04■□□□□ 0.16
AP1S1P61966 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.04■□□□□ 0.16
AP1S1P61966 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
AP1S1P61966 TARDBPP1-201ENST00000442013 1203 ntBASIC16.04■□□□□ 0.16
AP1S1P61966 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.04■□□□□ 0.16
AP1S1P61966 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.04■□□□□ 0.16
AP1S1P61966 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.04■□□□□ 0.16
AP1S1P61966 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.04■□□□□ 0.16
AP1S1P61966 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
AP1S1P61966 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.04■□□□□ 0.16
AP1S1P61966 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.04■□□□□ 0.16
AP1S1P61966 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
AP1S1P61966 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
AP1S1P61966 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.04■□□□□ 0.16
AP1S1P61966 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.04■□□□□ 0.16
AP1S1P61966 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.04■□□□□ 0.16
AP1S1P61966 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.04■□□□□ 0.16
AP1S1P61966 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.04■□□□□ 0.16
AP1S1P61966 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
AP1S1P61966 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.04■□□□□ 0.16
AP1S1P61966 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
AP1S1P61966 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
AP1S1P61966 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.03■□□□□ 0.16
AP1S1P61966 FER1L4-210ENST00000615531 5998 ntBASIC16.03■□□□□ 0.16
AP1S1P61966 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
AP1S1P61966 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
AP1S1P61966 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
AP1S1P61966 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
AP1S1P61966 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.03■□□□□ 0.16
AP1S1P61966 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.03■□□□□ 0.16
AP1S1P61966 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
AP1S1P61966 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.03■□□□□ 0.16
AP1S1P61966 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.03■□□□□ 0.16
AP1S1P61966 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.03■□□□□ 0.16
AP1S1P61966 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.03■□□□□ 0.16
AP1S1P61966 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.03■□□□□ 0.16
AP1S1P61966 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.03■□□□□ 0.16
AP1S1P61966 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.03■□□□□ 0.16
AP1S1P61966 AC135586.1-201ENST00000539323 574 ntBASIC16.03■□□□□ 0.16
AP1S1P61966 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
AP1S1P61966 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.03■□□□□ 0.16
AP1S1P61966 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.03■□□□□ 0.16
AP1S1P61966 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
AP1S1P61966 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
AP1S1P61966 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.03■□□□□ 0.16
AP1S1P61966 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
AP1S1P61966 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.03■□□□□ 0.16
AP1S1P61966 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S1P61966 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.03■□□□□ 0.16
AP1S1P61966 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.02■□□□□ 0.16
AP1S1P61966 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.02■□□□□ 0.16
AP1S1P61966 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S1P61966 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
AP1S1P61966 AC022188.1-201ENST00000620960 1664 ntBASIC16.02■□□□□ 0.16
AP1S1P61966 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S1P61966 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S1P61966 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S1P61966 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.02■□□□□ 0.16
AP1S1P61966 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
AP1S1P61966 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
AP1S1P61966 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S1P61966 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
AP1S1P61966 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S1P61966 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.02■□□□□ 0.16
AP1S1P61966 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S1P61966 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S1P61966 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms