Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.38□□□□□ -0.11
VBP1P61758 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.38□□□□□ -0.11
VBP1P61758 CD99P1-205ENST00000527459 561 ntBASIC14.38□□□□□ -0.11
VBP1P61758 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VBP1P61758 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VBP1P61758 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.38□□□□□ -0.11
VBP1P61758 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.38□□□□□ -0.11
VBP1P61758 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.38□□□□□ -0.11
VBP1P61758 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.38□□□□□ -0.11
VBP1P61758 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.38□□□□□ -0.11
VBP1P61758 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.38□□□□□ -0.11
VBP1P61758 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.38□□□□□ -0.11
VBP1P61758 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VBP1P61758 AC011477.6-201ENST00000604980 1927 ntBASIC14.38□□□□□ -0.11
VBP1P61758 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.38□□□□□ -0.11
VBP1P61758 SLC22A20-204ENST00000530038 1673 ntBASIC14.38□□□□□ -0.11
VBP1P61758 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
VBP1P61758 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
VBP1P61758 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VBP1P61758 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VBP1P61758 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VBP1P61758 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VBP1P61758 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.38□□□□□ -0.11
VBP1P61758 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
VBP1P61758 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.38□□□□□ -0.11
VBP1P61758 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VBP1P61758 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
VBP1P61758 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VBP1P61758 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.37□□□□□ -0.11
VBP1P61758 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.37□□□□□ -0.11
VBP1P61758 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.37□□□□□ -0.11
VBP1P61758 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
VBP1P61758 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.37□□□□□ -0.11
VBP1P61758 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VBP1P61758 AC027601.5-201ENST00000624065 2482 ntBASIC14.37□□□□□ -0.11
VBP1P61758 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
VBP1P61758 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
VBP1P61758 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 INTS4P1-203ENST00000641008 3683 ntBASIC14.37□□□□□ -0.11
VBP1P61758 PRORSD1P-201ENST00000295112 541 ntBASIC14.37□□□□□ -0.11
VBP1P61758 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.37□□□□□ -0.11
VBP1P61758 PMS2P1-201ENST00000431037 1228 ntBASIC14.37□□□□□ -0.11
VBP1P61758 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.37□□□□□ -0.11
VBP1P61758 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.37□□□□□ -0.11
VBP1P61758 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.37□□□□□ -0.11
VBP1P61758 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.37□□□□□ -0.11
VBP1P61758 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
VBP1P61758 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
VBP1P61758 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.37□□□□□ -0.11
VBP1P61758 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
VBP1P61758 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
VBP1P61758 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.37□□□□□ -0.11
VBP1P61758 AL928921.2-201ENST00000641325 2442 ntBASIC14.37□□□□□ -0.11
VBP1P61758 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VBP1P61758 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.37□□□□□ -0.11
VBP1P61758 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.37□□□□□ -0.11
VBP1P61758 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.37□□□□□ -0.11
VBP1P61758 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
VBP1P61758 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
VBP1P61758 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.37□□□□□ -0.11
VBP1P61758 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VBP1P61758 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.36□□□□□ -0.11
VBP1P61758 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.36□□□□□ -0.11
VBP1P61758 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.36□□□□□ -0.11
VBP1P61758 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.36□□□□□ -0.11
VBP1P61758 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.36□□□□□ -0.11
VBP1P61758 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.36□□□□□ -0.11
VBP1P61758 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VBP1P61758 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.36□□□□□ -0.11
VBP1P61758 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.36□□□□□ -0.11
VBP1P61758 COX11P1-201ENST00000489116 835 ntBASIC14.36□□□□□ -0.11
VBP1P61758 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
VBP1P61758 AL353135.1-201ENST00000606729 504 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms