Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCR4P61073 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.6□□□□□ -0.07
CXCR4P61073 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.6□□□□□ -0.07
CXCR4P61073 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.6□□□□□ -0.07
CXCR4P61073 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CXCR4P61073 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.6□□□□□ -0.07
CXCR4P61073 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.6□□□□□ -0.07
CXCR4P61073 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.6□□□□□ -0.07
CXCR4P61073 AC091304.2-201ENST00000564639 760 ntBASIC14.6□□□□□ -0.07
CXCR4P61073 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CXCR4P61073 AC107918.4-202ENST00000641623 219 ntBASIC14.6□□□□□ -0.07
CXCR4P61073 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CXCR4P61073 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CXCR4P61073 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.6□□□□□ -0.07
CXCR4P61073 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
CXCR4P61073 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
CXCR4P61073 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCR4P61073 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCR4P61073 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CXCR4P61073 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CXCR4P61073 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCR4P61073 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCR4P61073 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CXCR4P61073 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CXCR4P61073 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CXCR4P61073 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CXCR4P61073 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCR4P61073 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCR4P61073 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCR4P61073 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCR4P61073 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CXCR4P61073 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.59□□□□□ -0.07
CXCR4P61073 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
CXCR4P61073 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.59□□□□□ -0.07
CXCR4P61073 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCR4P61073 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCR4P61073 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.59□□□□□ -0.07
CXCR4P61073 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.59□□□□□ -0.07
CXCR4P61073 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCR4P61073 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CXCR4P61073 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CXCR4P61073 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CXCR4P61073 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CXCR4P61073 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CXCR4P61073 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.59□□□□□ -0.07
CXCR4P61073 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCR4P61073 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCR4P61073 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCR4P61073 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCR4P61073 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CXCR4P61073 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CXCR4P61073 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.58□□□□□ -0.08
CXCR4P61073 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CXCR4P61073 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CXCR4P61073 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.58□□□□□ -0.08
CXCR4P61073 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.58□□□□□ -0.08
CXCR4P61073 TSPY19P-201ENST00000418461 509 ntBASIC14.58□□□□□ -0.08
CXCR4P61073 TSPY18P-201ENST00000441642 509 ntBASIC14.58□□□□□ -0.08
CXCR4P61073 HCG4P8-203ENST00000443049 980 ntBASIC14.58□□□□□ -0.08
CXCR4P61073 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CXCR4P61073 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.58□□□□□ -0.08
CXCR4P61073 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.58□□□□□ -0.08
CXCR4P61073 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.58□□□□□ -0.08
CXCR4P61073 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.58□□□□□ -0.08
CXCR4P61073 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.58□□□□□ -0.08
CXCR4P61073 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.58□□□□□ -0.08
CXCR4P61073 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
CXCR4P61073 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.58□□□□□ -0.08
CXCR4P61073 AL445228.2-201ENST00000605589 952 ntBASIC14.58□□□□□ -0.08
CXCR4P61073 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.58□□□□□ -0.08
CXCR4P61073 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CXCR4P61073 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms