Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLRN1P58418 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 RPSAP43-201ENST00000402237 625 ntBASIC14.31□□□□□ -0.12
CLRN1P58418 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
CLRN1P58418 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.31□□□□□ -0.12
CLRN1P58418 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.31□□□□□ -0.12
CLRN1P58418 AP000344.2-201ENST00000512987 629 ntBASIC14.31□□□□□ -0.12
CLRN1P58418 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.31□□□□□ -0.12
CLRN1P58418 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.31□□□□□ -0.12
CLRN1P58418 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.31□□□□□ -0.12
CLRN1P58418 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 AC026979.3-201ENST00000607315 403 ntBASIC14.31□□□□□ -0.12
CLRN1P58418 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.31□□□□□ -0.12
CLRN1P58418 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.31□□□□□ -0.12
CLRN1P58418 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CLRN1P58418 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.31□□□□□ -0.12
CLRN1P58418 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
CLRN1P58418 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.31□□□□□ -0.12
CLRN1P58418 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLRN1P58418 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.31□□□□□ -0.12
CLRN1P58418 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CLRN1P58418 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.31□□□□□ -0.12
CLRN1P58418 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.31□□□□□ -0.12
CLRN1P58418 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.3□□□□□ -0.12
CLRN1P58418 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.3□□□□□ -0.12
CLRN1P58418 AP3S2-216ENST00000617003 1561 ntBASIC14.3□□□□□ -0.12
CLRN1P58418 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.3□□□□□ -0.12
CLRN1P58418 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CLRN1P58418 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLRN1P58418 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.3□□□□□ -0.12
CLRN1P58418 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CLRN1P58418 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CLRN1P58418 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLRN1P58418 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
CLRN1P58418 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 AC105917.1-201ENST00000506637 2539 ntBASIC14.3□□□□□ -0.12
CLRN1P58418 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CLRN1P58418 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CLRN1P58418 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.3□□□□□ -0.12
CLRN1P58418 AC211486.1-202ENST00000416371 468 ntBASIC14.3□□□□□ -0.12
CLRN1P58418 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.3□□□□□ -0.12
CLRN1P58418 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.3□□□□□ -0.12
CLRN1P58418 AC211476.1-201ENST00000503899 468 ntBASIC14.3□□□□□ -0.12
CLRN1P58418 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.3□□□□□ -0.12
CLRN1P58418 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.3□□□□□ -0.12
CLRN1P58418 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.3□□□□□ -0.12
CLRN1P58418 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.3□□□□□ -0.12
CLRN1P58418 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.3□□□□□ -0.12
CLRN1P58418 AC004835.2-201ENST00000603762 682 ntBASIC14.3□□□□□ -0.12
CLRN1P58418 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms