Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.66■□□□□ 0.1
CDH13P55290 FDX1P1-201ENST00000449115 551 ntBASIC15.66■□□□□ 0.1
CDH13P55290 KRT18P3-201ENST00000451602 1288 ntBASIC15.66■□□□□ 0.1
CDH13P55290 AC098859.1-201ENST00000502915 1238 ntBASIC15.66■□□□□ 0.1
CDH13P55290 RNA5SP416-201ENST00000516838 111 ntBASIC15.66■□□□□ 0.1
CDH13P55290 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
CDH13P55290 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDH13P55290 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 AC073389.1-201ENST00000595595 795 ntBASIC15.66■□□□□ 0.1
CDH13P55290 AC140113.2-201ENST00000604370 208 ntBASIC15.66■□□□□ 0.1
CDH13P55290 SPTSSB-204ENST00000617024 1292 ntBASIC15.66■□□□□ 0.1
CDH13P55290 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDH13P55290 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CDH13P55290 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDH13P55290 AC009090.5-201ENST00000624886 2285 ntBASIC15.66■□□□□ 0.1
CDH13P55290 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH13P55290 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH13P55290 AC138035.3-201ENST00000622706 2791 ntBASIC15.66■□□□□ 0.1
CDH13P55290 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
CDH13P55290 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 AC068587.6-202ENST00000641839 5619 ntBASIC15.66■□□□□ 0.1
CDH13P55290 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDH13P55290 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 AC090616.6-203ENST00000579186 1945 ntBASIC15.66■□□□□ 0.1
CDH13P55290 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH13P55290 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CDH13P55290 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDH13P55290 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH13P55290 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH13P55290 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH13P55290 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CDH13P55290 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CDH13P55290 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH13P55290 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDH13P55290 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.65■□□□□ 0.1
CDH13P55290 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.65■□□□□ 0.1
CDH13P55290 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH13P55290 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH13P55290 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH13P55290 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDH13P55290 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CDH13P55290 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH13P55290 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH13P55290 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH13P55290 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH13P55290 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH13P55290 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.65■□□□□ 0.1
CDH13P55290 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH13P55290 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH13P55290 AC006486.2-201ENST00000624246 2199 ntBASIC15.65■□□□□ 0.1
CDH13P55290 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH13P55290 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.1
CDH13P55290 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDH13P55290 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDH13P55290 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.64■□□□□ 0.1
CDH13P55290 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH13P55290 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH13P55290 AL109954.1-202ENST00000564051 2148 ntBASIC15.64■□□□□ 0.09
CDH13P55290 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
CDH13P55290 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.64■□□□□ 0.09
CDH13P55290 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms