Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN5P54829 AL022328.3-201ENST00000607943 679 ntBASIC16.48■□□□□ 0.23
PTPN5P54829 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN5P54829 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PTPN5P54829 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN5P54829 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
PTPN5P54829 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN5P54829 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN5P54829 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PTPN5P54829 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PTPN5P54829 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN5P54829 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN5P54829 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN5P54829 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PTPN5P54829 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.47■□□□□ 0.23
PTPN5P54829 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PTPN5P54829 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.47■□□□□ 0.23
PTPN5P54829 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PTPN5P54829 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PTPN5P54829 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PTPN5P54829 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.47■□□□□ 0.23
PTPN5P54829 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PTPN5P54829 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.47■□□□□ 0.23
PTPN5P54829 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN5P54829 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.47■□□□□ 0.23
PTPN5P54829 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN5P54829 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
PTPN5P54829 CDC14C-201ENST00000428251 1719 ntBASIC16.47■□□□□ 0.23
PTPN5P54829 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN5P54829 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PTPN5P54829 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PTPN5P54829 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN5P54829 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN5P54829 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PTPN5P54829 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN5P54829 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PTPN5P54829 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PTPN5P54829 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PTPN5P54829 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN5P54829 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.46■□□□□ 0.23
PTPN5P54829 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PTPN5P54829 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PTPN5P54829 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.46■□□□□ 0.23
PTPN5P54829 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.46■□□□□ 0.23
PTPN5P54829 AL589987.1-201ENST00000453380 819 ntBASIC16.46■□□□□ 0.23
PTPN5P54829 AC098859.1-201ENST00000502915 1238 ntBASIC16.46■□□□□ 0.23
PTPN5P54829 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.46■□□□□ 0.23
PTPN5P54829 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.46■□□□□ 0.23
PTPN5P54829 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN5P54829 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.46■□□□□ 0.23
PTPN5P54829 AP001889.1-201ENST00000525414 633 ntBASIC16.46■□□□□ 0.23
PTPN5P54829 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN5P54829 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PTPN5P54829 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN5P54829 AC006518.1-201ENST00000541449 943 ntBASIC16.46■□□□□ 0.23
PTPN5P54829 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.46■□□□□ 0.23
PTPN5P54829 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN5P54829 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN5P54829 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN5P54829 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms