Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ATXN3P54252 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.4■□□□□ 0.22
ATXN3P54252 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
ATXN3P54252 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
ATXN3P54252 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.4■□□□□ 0.22
ATXN3P54252 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.4■□□□□ 0.22
ATXN3P54252 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ATXN3P54252 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.39■□□□□ 0.22
ATXN3P54252 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ATXN3P54252 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ATXN3P54252 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 AL035456.1-201ENST00000456064 1369 ntBASIC16.39■□□□□ 0.21
ATXN3P54252 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ATXN3P54252 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 AC098614.1-201ENST00000368528 745 ntBASIC16.39■□□□□ 0.21
ATXN3P54252 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.39■□□□□ 0.21
ATXN3P54252 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
ATXN3P54252 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.39■□□□□ 0.21
ATXN3P54252 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.39■□□□□ 0.21
ATXN3P54252 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.39■□□□□ 0.21
ATXN3P54252 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.39■□□□□ 0.21
ATXN3P54252 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.39■□□□□ 0.21
ATXN3P54252 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.39■□□□□ 0.21
ATXN3P54252 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.39■□□□□ 0.21
ATXN3P54252 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.39■□□□□ 0.21
ATXN3P54252 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 AL132655.2-201ENST00000596276 594 ntBASIC16.39■□□□□ 0.21
ATXN3P54252 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.39■□□□□ 0.21
ATXN3P54252 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.39■□□□□ 0.21
ATXN3P54252 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.39■□□□□ 0.21
ATXN3P54252 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.39■□□□□ 0.21
ATXN3P54252 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
ATXN3P54252 AC138969.3-201ENST00000546612 1459 ntBASIC16.39■□□□□ 0.21
ATXN3P54252 AC138932.2-201ENST00000548268 1459 ntBASIC16.39■□□□□ 0.21
ATXN3P54252 AC126755.4-201ENST00000549796 1459 ntBASIC16.39■□□□□ 0.21
ATXN3P54252 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ATXN3P54252 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
ATXN3P54252 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.39■□□□□ 0.21
ATXN3P54252 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.39■□□□□ 0.21
ATXN3P54252 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.39■□□□□ 0.21
ATXN3P54252 AC131009.4-201ENST00000624048 1740 ntBASIC16.39■□□□□ 0.21
ATXN3P54252 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATXN3P54252 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
ATXN3P54252 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.38■□□□□ 0.21
ATXN3P54252 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.38■□□□□ 0.21
ATXN3P54252 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.38■□□□□ 0.21
ATXN3P54252 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ATXN3P54252 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ATXN3P54252 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.38■□□□□ 0.21
ATXN3P54252 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.38■□□□□ 0.21
ATXN3P54252 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.38■□□□□ 0.21
ATXN3P54252 AL353779.1-201ENST00000434793 351 ntBASIC16.38■□□□□ 0.21
ATXN3P54252 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.38■□□□□ 0.21
ATXN3P54252 MTND6P24-201ENST00000440466 518 ntBASIC16.38■□□□□ 0.21
ATXN3P54252 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.38■□□□□ 0.21
ATXN3P54252 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.38■□□□□ 0.21
ATXN3P54252 TP53TG3HP-202ENST00000569755 579 ntBASIC16.38■□□□□ 0.21
ATXN3P54252 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms