Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.5■□□□□ 0.07
PDX1P52945 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PDX1P52945 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PDX1P52945 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.5■□□□□ 0.07
PDX1P52945 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.5■□□□□ 0.07
PDX1P52945 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.5■□□□□ 0.07
PDX1P52945 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.5■□□□□ 0.07
PDX1P52945 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.5■□□□□ 0.07
PDX1P52945 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 AC123567.1-201ENST00000548294 1261 ntBASIC15.5■□□□□ 0.07
PDX1P52945 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.5■□□□□ 0.07
PDX1P52945 AC092337.1-201ENST00000568699 1129 ntBASIC15.5■□□□□ 0.07
PDX1P52945 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.5■□□□□ 0.07
PDX1P52945 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
PDX1P52945 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.5■□□□□ 0.07
PDX1P52945 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.5■□□□□ 0.07
PDX1P52945 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PDX1P52945 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 CYP2T1P-202ENST00000641596 2535 ntBASIC15.5■□□□□ 0.07
PDX1P52945 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PDX1P52945 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDX1P52945 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PDX1P52945 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.49■□□□□ 0.07
PDX1P52945 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.49■□□□□ 0.07
PDX1P52945 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PDX1P52945 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.49■□□□□ 0.07
PDX1P52945 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.49■□□□□ 0.07
PDX1P52945 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.49■□□□□ 0.07
PDX1P52945 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.49■□□□□ 0.07
PDX1P52945 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 TTTY23B-201ENST00000442790 549 ntBASIC15.49■□□□□ 0.07
PDX1P52945 AL139010.1-201ENST00000454878 894 ntBASIC15.49■□□□□ 0.07
PDX1P52945 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.49■□□□□ 0.07
PDX1P52945 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.49■□□□□ 0.07
PDX1P52945 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.49■□□□□ 0.07
PDX1P52945 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.49■□□□□ 0.07
PDX1P52945 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
PDX1P52945 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PDX1P52945 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.49■□□□□ 0.07
PDX1P52945 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.49■□□□□ 0.07
PDX1P52945 MIR6069-201ENST00000620069 79 ntBASIC15.49■□□□□ 0.07
PDX1P52945 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PDX1P52945 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
PDX1P52945 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.49■□□□□ 0.07
PDX1P52945 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PDX1P52945 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
PDX1P52945 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDX1P52945 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.49■□□□□ 0.07
PDX1P52945 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.49■□□□□ 0.07
PDX1P52945 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.49■□□□□ 0.07
PDX1P52945 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PDX1P52945 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
PDX1P52945 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.48■□□□□ 0.07
PDX1P52945 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.48■□□□□ 0.07
PDX1P52945 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PDX1P52945 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.48■□□□□ 0.07
PDX1P52945 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDX1P52945 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms