Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
PDE6CP51160 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.3■□□□□ 0.36
PDE6CP51160 FLJ16779-201ENST00000612722 7638 ntBASIC17.3■□□□□ 0.36
PDE6CP51160 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PDE6CP51160 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6CP51160 PRAL-201ENST00000624952 3286 ntBASIC17.3■□□□□ 0.36
PDE6CP51160 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.3■□□□□ 0.36
PDE6CP51160 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PDE6CP51160 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PDE6CP51160 AC107890.1-201ENST00000422478 521 ntBASIC17.3■□□□□ 0.36
PDE6CP51160 FAM8A3P-201ENST00000427218 844 ntBASIC17.3■□□□□ 0.36
PDE6CP51160 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.3■□□□□ 0.36
PDE6CP51160 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.3■□□□□ 0.36
PDE6CP51160 SPDYE14P-201ENST00000442619 822 ntBASIC17.3■□□□□ 0.36
PDE6CP51160 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.3■□□□□ 0.36
PDE6CP51160 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.3■□□□□ 0.36
PDE6CP51160 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6CP51160 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.3■□□□□ 0.36
PDE6CP51160 SPCS2P1-201ENST00000561636 679 ntBASIC17.3■□□□□ 0.36
PDE6CP51160 AC024267.1-201ENST00000582320 895 ntBASIC17.3■□□□□ 0.36
PDE6CP51160 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.3■□□□□ 0.36
PDE6CP51160 AL096865.1-201ENST00000606796 927 ntBASIC17.3■□□□□ 0.36
PDE6CP51160 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6CP51160 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6CP51160 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6CP51160 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PDE6CP51160 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6CP51160 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6CP51160 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6CP51160 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6CP51160 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.3■□□□□ 0.36
PDE6CP51160 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PDE6CP51160 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6CP51160 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6CP51160 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.29■□□□□ 0.36
PDE6CP51160 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PDE6CP51160 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PDE6CP51160 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6CP51160 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.29■□□□□ 0.36
PDE6CP51160 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PDE6CP51160 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6CP51160 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
PDE6CP51160 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PDE6CP51160 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PDE6CP51160 PKD1P5-201ENST00000532415 10291 ntBASIC17.29■□□□□ 0.36
PDE6CP51160 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.29■□□□□ 0.36
PDE6CP51160 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6CP51160 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.29■□□□□ 0.36
PDE6CP51160 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6CP51160 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 AC142381.1-201ENST00000426099 345 ntBASIC17.29■□□□□ 0.36
PDE6CP51160 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6CP51160 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.29■□□□□ 0.36
PDE6CP51160 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.29■□□□□ 0.36
PDE6CP51160 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.29■□□□□ 0.36
PDE6CP51160 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.29■□□□□ 0.36
PDE6CP51160 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.29■□□□□ 0.36
PDE6CP51160 AC140878.1-201ENST00000565277 250 ntBASIC17.29■□□□□ 0.36
PDE6CP51160 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.29■□□□□ 0.36
PDE6CP51160 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.29■□□□□ 0.36
PDE6CP51160 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 FOXO1B-201ENST00000504678 1527 ntBASIC17.29■□□□□ 0.36
PDE6CP51160 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6CP51160 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.29■□□□□ 0.36
PDE6CP51160 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 AP001282.1-201ENST00000531301 1499 ntBASIC17.29■□□□□ 0.36
PDE6CP51160 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6CP51160 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PDE6CP51160 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6CP51160 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6CP51160 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PDE6CP51160 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6CP51160 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6CP51160 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PDE6CP51160 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6CP51160 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6CP51160 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.28■□□□□ 0.36
PDE6CP51160 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.28■□□□□ 0.36
PDE6CP51160 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6CP51160 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6CP51160 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6CP51160 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms